larry._datasets._data¶
Module Contents¶
Classes¶
Attributes¶
- larry._datasets._data.info¶
- larry._datasets._data.note¶
- class larry._datasets._data.DataHandler(silent=False)¶
- property URLPaths¶
- property X¶
- property obs¶
- property var¶
- property X_clone¶
- property raw_h5ad_path¶
- property gene_filtered_h5ad_path¶
- property timepoint_recovery_h5ad_path¶
- property fate_prediction_h5ad_path¶
- property transfer_learning_h5ad_path¶
- compose_adata()¶
- to_h5ad(h5ad_path)¶
- read_h5ad(h5ad_path)¶
- __call__()¶
- class larry._datasets._data.inVitroData(silent=False)¶
Bases:
DataHandler- _url_paths¶
- _dataset = in_vitro¶
- fate_prediction(split_key='Well', write_h5ad=False)¶
- timepoint_recovery(split_key='Time point')¶
- transfer_learning(split_key='Time point')¶
- class larry._datasets._data.inVivoData(silent=False)¶
Bases:
DataHandler- _url_paths¶
- _dataset = in_vivo¶
- class larry._datasets._data.CytokinePerturbationData(silent=False)¶
Bases:
DataHandler- _url_paths¶
- _dataset = cytokine_perturbation¶