larry._analysis._get_lineage_obs¶
Module Contents¶
Functions¶
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Parameters: |
Attributes¶
- larry._analysis._get_lineage_obs.__module_name__ = _get_lineage_obs.py¶
- larry._analysis._get_lineage_obs.__author__¶
- larry._analysis._get_lineage_obs.__email__¶
- larry._analysis._get_lineage_obs.get_lineage_obs(adata: anndata.AnnData, lineage_idx: float, lineage_key: str = 'clone_idx', obs_key: str = 'Cell type annotation', time_key: str = 'Time point') pandas.DataFrame¶
- adata
type: anndata.AnnData
- lineage_idx
type: float
- lineage_key
type: str default: “clone_idx”
- obs_key
type: str default: “Cell type annotation”
- time_key
type: str default: “Time point”
- lineage_obs
type: pandas.DataFrame