larry._datasets._url_path_interfaces

Module Contents

Classes

FormattedURLFile	Helper class that provides a standard way to create an ABC using
URLPathInterface
inVitroURLPaths
inVivoURLPaths
CytokinePerturbationURLPaths

class larry._datasets._url_path_interfaces.FormattedURLFile(file, download_dir, download_structure, base_url)

Bases: larry._utils.AutoParseBase

Helper class that provides a standard way to create an ABC using inheritance.

property _fname

property URL

property _download_path

property fpath

property downloaded

class larry._datasets._url_path_interfaces.URLPathInterface(download_path=os.getcwd())

property gene_names

property clone_matrix

property normed_counts

property metadata

property __attributes__: Dict

property _attrs

property _header

property _description

_format(file)

download(silent=False, bar=False)

__repr__()

Return repr(self).

class larry._datasets._url_path_interfaces.inVitroURLPaths(download_path=os.getcwd())

Bases: URLPathInterface

_download_structure = KleinLabData/in_vitro

_dataset = inVitro

class larry._datasets._url_path_interfaces.inVivoURLPaths(download_path=os.getcwd())

Bases: URLPathInterface

_download_structure = KleinLabData/in_vivo

_dataset = inVivo

class larry._datasets._url_path_interfaces.CytokinePerturbationURLPaths(download_path=os.getcwd())

Bases: URLPathInterface

_download_structure = KleinLabData/cytokine_perturbation

_dataset = cytokinePerturbation